Rhodoferax aquaticus

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax aquaticus is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single flagellum, which aids in its motility. This species has one replicon, indicating that it contains a single circular chromosome. The genomic information for Rhodoferax aquaticus can be accessed through the accession number CP036282.1. As a member of the microbial community, Rhodoferax aquaticus likely plays a role in the biogeochemical cycling of elements within aquatic environments. Its Gram-negative nature suggests it has a complex cell wall structure, which can impact its interactions with other microorganisms and its ability to adapt to various ecological niches. The presence of flagella may enhance its capacity to navigate through different aquatic habitats, potentially influencing its ecological functions, such as nutrient cycling and organic matter decomposition. Understanding the traits of Rhodoferax aquaticus provides insight into its ecological significance and potential applications in environmental microbiology, particularly in the management of water quality and bioremediation processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax aquaticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax aquaticus
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax aquaticus , Complete Genome

Gene Summary

Adenine Count

1004982 bp

Thymine Count

1011834 bp

Guanine Count

1360438 bp

Cytosine Count

1360436 bp

Genome Length

4737690 bp

Protein-coding Genes

4184 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeEXZ61_08090Q28TL1Positive1731925 - 173292335108.6
alpha/beta hydrolaseEXZ61_08095Not AvailablePositive1732992 - 173372326251.6
cobyric acid synthaseEXZ61_08100Q21V75Positive1733720 - 173531856220.4
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseEXZ61_08105C5CKN8Positive1735591 - 173675139796.9
adenosylcobinamide-gdp ribazoletransferaseEXZ61_08110Q21V77Positive1736738 - 173758929259.3
phosphoglycerate kinaseEXZ61_08115P39701Positive1737594 - 173816621095.2
hdod domain-containing proteinEXZ61_08120O83112Negative1738163 - 173897529684.3
endonuclease iiiEXZ61_08125P0AB84Negative1739011 - 173965223425.7
hdod domain-containing proteinEXZ61_08130O83112Negative1739649 - 174045529529.5
plp-dependent aminotransferase family proteinEXZ61_08135Q72LL6Positive1740580 - 174176742364.2

Displaying genes 1721 – 1730 of 4368 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.