Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax sediminis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
783170 bp
Thymine Count
781148 bp
Guanine Count
1408635 bp
Cytosine Count
1414544 bp
Genome Length
4387497 bp
Protein-coding Genes
4191 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | EUB48_11405 | P58669 | Negative | 2363193 - 2364467 | 46084.2 |
| helix-turn-helix domain-containing protein | EUB48_11410 | A8GHW6 | Negative | 2364467 - 2365387 | 31121.7 |
| type iv pilus biogenesis/stability protein pilw | EUB48_11415 | Q9HXJ2 | Negative | 2365380 - 2366216 | 30915.9 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | EUB48_11420 | Q21W25 | Negative | 2366220 - 2367368 | 42194.9 |
| nucleoside-diphosphate kinase | EUB48_11425 | A1VNF0 | Negative | 2367388 - 2367813 | 15322.5 |
| rrna pseudouridine synthase | EUB48_11430 | Q8FHV4 | Negative | 2367968 - 2369419 | 51877.5 |
| smc-scp complex subunit scpb | EUB48_11435 | Q83CP9 | Negative | 2369416 - 2370138 | 26155.9 |
| rlua family pseudouridine synthase | EUB48_11440 | Q8XYX8 | Negative | 2370266 - 2371186 | 33390.6 |
| outer membrane protein assembly factor bamd | EUB48_11445 | Q9K0B1 | Positive | 2371309 - 2372118 | 30296.9 |
| atp-dependent dna helicase | EUB48_11450 | P76257 | Negative | 2372081 - 2374120 | 74193.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
