Zobellia laminariae

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Zobellia

Description

Zobellia laminariae is a marine bacterium characterized by having a single replicon. This organism is cataloged under the accession number CM127807.1. While specific details regarding its morphology, metabolic capabilities, or habitat preferences are not provided, Zobellia laminariae is known to be associated with marine environments, particularly in relation to its interaction with macroalgae. The single replicon indicates a relatively simple genomic organization, which can have implications for its adaptability and evolutionary strategies within its ecological niche. The organism's association with marine algae suggests that it may play a role in the decomposition of organic matter or in nutrient cycling within these ecosystems. Such interactions can be crucial for maintaining the health and stability of marine habitats, particularly in areas where macroalgae are abundant. Understanding the ecological role of Zobellia laminariae can provide insights into the dynamics of microbial communities in marine environments. Its interactions with algae could influence the growth and health of these primary producers, thereby impacting the entire marine food web. Further studies could elucidate the specific functions and interactions of Zobellia laminariae, contributing to a broader understanding of microbial ecology in marine systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusZobellia
SpeciesZobellia laminariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Zobellia laminariae , Complete Genome

Gene Summary

Adenine Count

1630661 bp

Thymine Count

1629404 bp

Guanine Count

950237 bp

Cytosine Count

946358 bp

Genome Length

5156660 bp

Protein-coding Genes

4211 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent transcriptional regulatorD9V96_002705P14375Negative657502 - 65866543046.3
duf6268 family outer membrane beta-barrel proteinD9V96_002710Not AvailableNegative658678 - 65955633254.0
mechanosensitive ion channel family proteinD9V96_002715Q57362Negative659558 - 66048434915.1
abc transporter permeaseD9V96_002720Q58430Negative660487 - 66181549312.2
abc transporter atp-binding proteinD9V96_002725C0SPB4Negative661808 - 66274935388.7
molecular chaperone dnajD9V96_002730Q5LED4Negative662931 - 66405540229.7
nucleotide exchange factor grpeD9V96_002735Q8A8C4Negative664065 - 66461020781.7
tigr01777 family oxidoreductaseD9V96_002740Q5HQV8Negative664814 - 66577935438.6
trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmdD9V96_002745Q31JE7Negative665908 - 66656725085.1
duf4920 domain-containing proteinD9V96_002750Not AvailableNegative666569 - 66706318564.5

Displaying genes 541 – 550 of 2074 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.