Zobellia laminariae

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Zobellia

Description

Zobellia laminariae is a marine bacterium characterized by having a single replicon. This organism is cataloged under the accession number CM127807.1. While specific details regarding its morphology, metabolic capabilities, or habitat preferences are not provided, Zobellia laminariae is known to be associated with marine environments, particularly in relation to its interaction with macroalgae. The single replicon indicates a relatively simple genomic organization, which can have implications for its adaptability and evolutionary strategies within its ecological niche. The organism's association with marine algae suggests that it may play a role in the decomposition of organic matter or in nutrient cycling within these ecosystems. Such interactions can be crucial for maintaining the health and stability of marine habitats, particularly in areas where macroalgae are abundant. Understanding the ecological role of Zobellia laminariae can provide insights into the dynamics of microbial communities in marine environments. Its interactions with algae could influence the growth and health of these primary producers, thereby impacting the entire marine food web. Further studies could elucidate the specific functions and interactions of Zobellia laminariae, contributing to a broader understanding of microbial ecology in marine systems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusZobellia
SpeciesZobellia laminariae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Zobellia laminariae , Complete Genome

Gene Summary

Adenine Count

1630661 bp

Thymine Count

1629404 bp

Guanine Count

950237 bp

Cytosine Count

946358 bp

Genome Length

5156660 bp

Protein-coding Genes

4211 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal phosphate-dependent aminotransferaseD9V96_002505Q2RL44Positive613250 - 61443743438.7
permeaseD9V96_002510Not AvailablePositive614566 - 61571141872.1
alanine dehydrogenaseD9V96_002515Q6LX40Positive615755 - 61683438729.2
hypothetical proteinD9V96_002520Not AvailableNegative616929 - 61727312813.7
adp-forming succinate--coa ligase subunit betaD9V96_002525A0LZD4Negative617546 - 61873942867.6
lon peptidase substrate-binding domain-containing proteinD9V96_002530Not AvailableNegative618930 - 61956824668.0
diaminopimelate decarboxylaseD9V96_002535O27390Positive619734 - 62097546055.4
thioredoxin family proteinD9V96_002540Q09214Positive621035 - 62156820364.4
m1 family metallopeptidaseD9V96_002545Q96ZT9Positive621724 - 62430999031.4
imp dehydrogenaseD9V96_002550Q9KGN8Negative624392 - 62586452372.5

Displaying genes 501 – 510 of 2074 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.