Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxa | O1Q98_12810 | P0AA27 | Positive | 2821893 - 2822219 | 11860.3 |
| transcription termination factor rho | O1Q98_12815 | P0AG32 | Positive | 2822638 - 2823897 | 46955.0 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | O1Q98_12820 | Q8ZAE1 | Positive | 2824163 - 2825245 | 39140.6 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | O1Q98_12825 | Q8ZAE3 | Positive | 2825371 - 2826501 | 42019.7 |
| udp-n-acetyl-d-mannosamine dehydrogenase | O1Q98_12830 | Q8ZAE4 | Positive | 2826498 - 2827781 | 46593.3 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | O1Q98_12835 | Q8FBQ3 | Positive | 2827795 - 2828520 | 26462.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | O1Q98_12840 | P27833 | Positive | 2828664 - 2829794 | 41611.1 |
| lipid iii flippase wzxe | O1Q98_12845 | P0AAA7 | Positive | 2829794 - 2831041 | 44449.4 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | O1Q98_12850 | Q6CZF0 | Positive | 2831124 - 2832206 | 40858.4 |
| eca oligosaccharide polymerase | O1Q98_12855 | B2VG51 | Positive | 2832199 - 2833527 | 49927.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

