Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional activator ilvy | O1Q98_12760 | P0A2Q3 | Negative | 2804258 - 2805145 | 33013.1 |
| ketol-acid reductoisomerase | O1Q98_12765 | C6DHG3 | Positive | 2805304 - 2806782 | 53693.6 |
| dmt family transporter | O1Q98_12770 | O29740 | Negative | 2806845 - 2807780 | 33460.2 |
| sodium/proline symporter putp | O1Q98_12775 | P07117 | Negative | 2808488 - 2809987 | 53653.5 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | O1Q98_12780 | O52485 | Positive | 2810287 - 2814279 | 144412.0 |
| peptidylprolyl isomerase ppic | O1Q98_12785 | P0A9L7 | Negative | 2814333 - 2814614 | 10324.4 |
| dna helicase rep | O1Q98_12790 | Q9L6S1 | Positive | 2814798 - 2816822 | 77758.1 |
| glycoside hydrolase family 28 protein | O1Q98_12795 | P15922 | Negative | 2816945 - 2818759 | 64160.2 |
| exopolyphosphatase | O1Q98_12800 | C6DHF6 | Negative | 2818976 - 2820472 | 55572.3 |
| atp-dependent rna helicase rhlb | O1Q98_12805 | C6DHF5 | Negative | 2820482 - 2821774 | 48064.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

