Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | O1Q98_12610 | P44758 | Negative | 2775985 - 2776716 | 26945.2 |
| dna-binding transcriptional regulator oxyr | O1Q98_12615 | Q9X725 | Positive | 2776880 - 2777797 | 34499.2 |
| is5 family transposase | O1Q98_12620 | Q6CZB1 | Negative | 2777780 - 2779181 | 52227.9 |
| hth-type transcriptional repressor fabr | O1Q98_12625 | A1JI38 | Positive | 2779385 - 2780029 | 24243.0 |
| yijd family membrane protein | O1Q98_12630 | P0AF42 | Positive | 2780044 - 2780415 | 13314.6 |
| trna (uridine(54)-c5)-methyltransferase trma | O1Q98_12635 | C6CG41 | Negative | 2780412 - 2781515 | 41901.3 |
| tonb-dependent vitamin b12 receptor btub | O1Q98_12640 | Q1CBU1 | Positive | 2781980 - 2783878 | 70604.6 |
| glutamate racemase | O1Q98_12645 | C6DHQ3 | Positive | 2783823 - 2784695 | 32045.8 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2785052 - 2786591 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2786660 - 2786736 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

