Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | O1Q98_12560 | P17888 | Negative | 2764628 - 2766827 | 79291.0 |
| 50s ribosomal protein l31 | O1Q98_12565 | B5F0S7 | Positive | 2767171 - 2767386 | 7782.33 |
| met regulon transcriptional regulator metj | O1Q98_12570 | A7ML79 | Negative | 2767568 - 2767885 | 12212.4 |
| cystathionine gamma-synthase | O1Q98_12575 | P00935 | Positive | 2768071 - 2769231 | 41436.6 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | O1Q98_12580 | P00562 | Positive | 2769234 - 2771666 | 88717.8 |
| is5 family transposase | O1Q98_12585 | P25906 | Negative | 2771778 - 2772669 | 31077.3 |
| zinc-binding dehydrogenase | O1Q98_12590 | Q8WWV3 | Negative | 2772701 - 2773189 | 17424.8 |
| alcohol dehydrogenase catalytic domain-containing protein | O1Q98_12595 | Q8H0M1 | Negative | 2773329 - 2773625 | 10432.6 |
| tetr/acrr family transcriptional regulator | O1Q98_12600 | Not Available | Negative | 2773722 - 2774360 | 23135.1 |
| methylenetetrahydrofolate reductase | O1Q98_12605 | P71319 | Positive | 2774881 - 2775777 | 33315.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

