Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | O1Q98_12210 | C6DII7 | Positive | 2688946 - 2691015 | 76125.3 |
| permease | O1Q98_12215 | Not Available | Negative | 2691148 - 2692032 | 31564.4 |
| hypothetical protein | O1Q98_12220 | P0DW03 | Negative | 2692124 - 2693011 | 34179.5 |
| ompa family protein | O1Q98_12225 | P0DW02 | Negative | 2693014 - 2693775 | 29348.4 |
| hypothetical protein | O1Q98_12230 | P0DW01 | Negative | 2693780 - 2695048 | 46534.0 |
| urea carboxylase | O1Q98_12235 | A5H0J2 | Negative | 2695362 - 2698952 | 130496.0 |
| urea carboxylase-associated family protein | O1Q98_12240 | O31473 | Negative | 2699080 - 2699745 | 24671.1 |
| urea carboxylase-associated family protein | O1Q98_12245 | Not Available | Negative | 2699748 - 2700467 | 26613.3 |
| abc transporter atp-binding protein | O1Q98_12250 | A0K739 | Negative | 2700495 - 2701274 | 28922.2 |
| abc transporter permease subunit | O1Q98_12255 | Q47539 | Negative | 2701305 - 2702117 | 29913.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

