Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | O1Q98_12110 | Q8ZNL7 | Positive | 2666859 - 2668172 | 47882.5 |
| dihydropyrimidinase | O1Q98_12115 | Q9I676 | Positive | 2668200 - 2669651 | 52082.8 |
| zn-dependent hydrolase | O1Q98_12120 | Q6DTN4 | Positive | 2669743 - 2671032 | 45898.9 |
| alpha/beta hydrolase | O1Q98_12125 | Not Available | Negative | 2671113 - 2672282 | 44346.7 |
| valine--pyruvate transaminase | O1Q98_12130 | P09053 | Negative | 2672797 - 2674056 | 46638.3 |
| translation elongation factor 4 | O1Q98_12135 | Q3AF13 | Negative | 2674191 - 2675990 | 66565.4 |
| aldose 1-epimerase family protein | O1Q98_12140 | Not Available | Positive | 2676494 - 2677702 | 44298.6 |
| rhodanese-like domain-containing protein | O1Q98_12145 | Not Available | Negative | 2677771 - 2678169 | 14327.1 |
| glyoxylate/hydroxypyruvate reductase ghrb | O1Q98_12150 | Q6DB24 | Negative | 2678230 - 2679192 | 34737.2 |
| lysr family transcriptional regulator | O1Q98_12155 | P43011 | Negative | 2679386 - 2680288 | 33574.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

