Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | O1Q98_11860 | Q1C0B5 | Negative | 2615079 - 2615336 | 9597.77 |
| ribonuclease p protein component | O1Q98_11865 | Q6CYR1 | Negative | 2615300 - 2615659 | 13970.2 |
| 50s ribosomal protein l34 | O1Q98_11870 | A7ZTQ9 | Negative | 2615678 - 2615818 | 5380.74 |
| chromosomal replication initiator protein dnaa | O1Q98_11875 | C6DGH7 | Positive | 2616509 - 2617897 | 52121.4 |
| dna polymerase iii subunit beta | O1Q98_11880 | P0A990 | Positive | 2617902 - 2619002 | 40563.9 |
| dna replication/repair protein recf | O1Q98_11885 | C6DGH9 | Positive | 2619135 - 2620220 | 40548.7 |
| dna topoisomerase (atp-hydrolyzing) subunit b | O1Q98_11890 | P0AES7 | Positive | 2620238 - 2622727 | 92511.0 |
| gnat family n-acetyltransferase | O1Q98_11895 | Q8ZKE6 | Negative | 2622942 - 2623370 | 16379.0 |
| gnat family n-acetyltransferase | O1Q98_11900 | Q8ZKE6 | Negative | 2623348 - 2623803 | 17409.9 |
| mfs transporter | O1Q98_11905 | O06481 | Negative | 2623893 - 2625080 | 41214.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

