Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | O1Q98_11810 | P72979 | Negative | 2602727 - 2603149 | 15761.2 |
| nmra family nad(p)-binding protein | O1Q98_11815 | Not Available | Positive | 2603236 - 2604096 | 29984.9 |
| beta-glucoside-specific pts transporter subunit iiabc | O1Q98_11820 | P40739 | Positive | 2604429 - 2606333 | 66914.4 |
| glycoside hydrolase family 1 protein | O1Q98_11825 | P42403 | Positive | 2606330 - 2607754 | 53316.2 |
| prd domain-containing protein | O1Q98_11830 | P39805 | Positive | 2607751 - 2608599 | 32146.9 |
| tetr/acrr family transcriptional regulator | O1Q98_11835 | O31500 | Negative | 2609052 - 2609621 | 20868.9 |
| is5 family transposase | O1Q98_11840 | Q69TH8 | Positive | 2609753 - 2610845 | 39577.7 |
| sdr family oxidoreductase | O1Q98_11845 | Q8AVY8 | Positive | 2610916 - 2611698 | 28375.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | O1Q98_11850 | A1JT87 | Negative | 2611959 - 2613323 | 49080.7 |
| membrane protein insertase yidc | O1Q98_11855 | C6DK98 | Negative | 2613445 - 2615076 | 60556.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

