Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | O1Q98_11760 | B2VBI7 | Positive | 2594100 - 2595749 | 61884.1 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | O1Q98_11765 | B2VBI6 | Positive | 2595746 - 2596084 | 12212.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | O1Q98_11770 | A4WAL9 | Positive | 2596081 - 2596479 | 14248.0 |
| lysr family transcriptional regulator | O1Q98_11775 | Q9EXL7 | Negative | 2596529 - 2597467 | 35486.3 |
| gnat family n-acetyltransferase | O1Q98_11780 | Q7PCJ8 | Positive | 2597561 - 2598040 | 18132.3 |
| nad(p)-dependent oxidoreductase | O1Q98_11785 | P71037 | Negative | 2598142 - 2598753 | 21562.7 |
| helix-turn-helix domain-containing protein | O1Q98_11790 | P0ACN2 | Positive | 2598896 - 2599282 | 14869.0 |
| 4-hydroxyphenylpyruvate dioxygenase | O1Q98_11795 | P80064 | Negative | 2599455 - 2600540 | 40526.2 |
| mbl fold metallo-hydrolase | O1Q98_11800 | P96655 | Positive | 2600856 - 2601629 | 27801.4 |
| helix-turn-helix domain-containing protein | O1Q98_11805 | A0A0H2ZIC3 | Positive | 2601670 - 2602626 | 35448.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

