Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | O1Q98_11710 | O34606 | Positive | 2580627 - 2581451 | 29907.2 |
| 6-phosphogluconate phosphatase | O1Q98_11715 | P31467 | Negative | 2581468 - 2582133 | 24565.8 |
| ncs2 family permease | O1Q98_11720 | P31466 | Positive | 2582418 - 2583755 | 46441.2 |
| hypothetical protein | O1Q98_11725 | P0ADM9 | Negative | 2583818 - 2584558 | 28002.6 |
| 4fe-4s dicluster domain-containing protein | O1Q98_11730 | P0AAK6 | Negative | 2584869 - 2585393 | 18584.5 |
| formate-dependent uric acid utilization protein aega | O1Q98_11735 | P37127 | Negative | 2585397 - 2587460 | 74519.4 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | O1Q98_11740 | A6TFA0 | Positive | 2589074 - 2590216 | 41662.0 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | O1Q98_11745 | B1LLK8 | Positive | 2590216 - 2591199 | 36888.7 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | O1Q98_11750 | A6TF98 | Positive | 2591196 - 2593187 | 73993.2 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | O1Q98_11755 | A4WAM2 | Positive | 2593201 - 2594100 | 33337.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

