Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--ammonia ligase | O1Q98_11460 | P0A1P7 | Positive | 2523549 - 2524958 | 51630.3 |
| nitrogen regulation protein nr(ii) | O1Q98_11465 | P06218 | Positive | 2525163 - 2526212 | 38692.5 |
| nitrogen regulation protein nr(i) | O1Q98_11470 | P0AFB9 | Positive | 2526221 - 2527633 | 52368.1 |
| yshb family small membrane protein | O1Q98_11475 | Not Available | Positive | 2527778 - 2527900 | 4080.9 |
| oxygen-independent coproporphyrinogen iii oxidase | O1Q98_11480 | P0A1E2 | Negative | 2528016 - 2529389 | 52515.0 |
| der gtpase-activating protein yihi | O1Q98_11485 | C6DJE0 | Negative | 2529571 - 2530104 | 19978.5 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | O1Q98_11490 | C5BC84 | Positive | 2530326 - 2530973 | 24070.0 |
| dna polymerase i | O1Q98_11495 | P00582 | Negative | 2531463 - 2534255 | 102924.0 |
| is5 family transposase | O1Q98_11500 | P52234 | Negative | 2534664 - 2535288 | 22887.9 |
| serine/threonine protein kinase | O1Q98_11505 | Q8X8H9 | Negative | 2535311 - 2536297 | 38115.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

