Dickeya lacustris S29

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya lacustris S29 is a rod-shaped bacterium characterized by the presence of a single flagellum, which facilitates its motility. This species possesses one replicon in its genetic structure, indicating a streamlined genome organization. The accession number for its genomic data is CP114280.1, which can be referenced for more detailed genetic and molecular studies. As a member of the Dickeya genus, which is known for its role as a plant pathogen, D. lacustris S29 may contribute to ecological interactions within aquatic environments. The presence of flagella suggests that this bacterium can actively move through its habitat, which may enhance its ability to colonize plant surfaces or interact with other microbial communities. Understanding the motility and genetic characteristics of Dickeya lacustris S29 can provide insights into its ecological role and potential impact on host plants. Since Dickeya species are often associated with plant diseases, studying D. lacustris S29 may offer valuable information regarding its pathogenic potential and interactions within aquatic ecosystems. This knowledge is crucial for developing strategies to manage plant health and mitigate the effects of bacterial infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya lacustris
StrainS29

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatlake water; rhizosphere of waterside plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya lacustris S29, Complete Genome

Gene Summary

Adenine Count

1019733 bp

Thymine Count

1028288 bp

Guanine Count

1167877 bp

Cytosine Count

1151875 bp

Genome Length

4367773 bp

Protein-coding Genes

3671 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (guanosine(18)-2'-o)-methyltransferase trmhO1Q98_11410P0AGJ3Positive2511672 - 251238226340.7
atp-dependent dna helicase recgO1Q98_11415B7UM74Positive2512382 - 251446376680.4
hypothetical proteinO1Q98_11420Not AvailableNegative2514527 - 251491314208.7
cysteine peptidase family c39 domain-containing proteinO1Q98_11425Not AvailableNegative2514915 - 25151097345.02
uracil-xanthine permease family proteinO1Q98_11430P0AGN1Positive2515652 - 251704048715.1
asma family proteinO1Q98_11435P31433Positive2517196 - 251897164954.1
fatty acid biosynthesis protein fabyO1Q98_11440P0ADQ4Negative2519102 - 252004334682.7
d-aminoacyl-trna deacylaseO1Q98_11445A1JHU4Negative2520075 - 252051215723.9
glucose-1-phosphataseO1Q98_11450P0A8Y3Negative2520520 - 252113123009.4
ribosome-dependent gtpase typaO1Q98_11455H9L427Negative2521344 - 252316767290.6

Displaying genes 2391 – 2400 of 3962 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.