Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhjd | O1Q98_11160 | P45417 | Positive | 2448752 - 2449699 | 34639.7 |
| 4-oxalocrotonate tautomerase family protein | O1Q98_11165 | P45418 | Positive | 2449722 - 2449925 | 7237.7 |
| sugar kinase | O1Q98_11170 | P45416 | Positive | 2450108 - 2451040 | 33750.0 |
| pitrilysin family protein | O1Q98_11175 | P50335 | Negative | 2451138 - 2452586 | 53634.9 |
| dicarboxylate/amino acid:cation symporter | O1Q98_11180 | C6DGQ8 | Negative | 2452992 - 2454266 | 44871.5 |
| glycosyl hydrolase family 8 | O1Q98_11185 | P27032 | Negative | 2454686 - 2455687 | 37153.1 |
| cellulose synthase | O1Q98_11190 | P37719 | Negative | 2455701 - 2456177 | 17886.5 |
| cellulose synthase subunit bcsc-related outer membrane protein | O1Q98_11195 | P58938 | Negative | 2456180 - 2460223 | 145026.0 |
| cellulose biosynthesis cyclic di-gmp-binding regulatory protein bcsb | O1Q98_11200 | P37652 | Negative | 2460235 - 2462859 | 93696.5 |
| udp-forming cellulose synthase catalytic subunit | O1Q98_11205 | Q9WX61 | Negative | 2462856 - 2464961 | 78563.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

