Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | O1Q98_11060 | Q6GLT8 | Positive | 2430291 - 2431173 | 32720.8 |
| plp-dependent aminotransferase family protein | O1Q98_11065 | H3ZPL1 | Negative | 2431512 - 2432696 | 43630.4 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | O1Q98_11070 | P0A192 | Negative | 2432776 - 2433477 | 25669.1 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | O1Q98_11075 | P0A9S8 | Negative | 2433484 - 2434251 | 28185.5 |
| high-affinity branched-chain amino acid abc transporter permease livm | O1Q98_11080 | P22729 | Negative | 2434248 - 2435522 | 46440.6 |
| high-affinity branched-chain amino acid abc transporter permease livh | O1Q98_11085 | P0A2J2 | Negative | 2435519 - 2436445 | 32940.4 |
| branched-chain amino acid abc transporter substrate-binding protein | O1Q98_11090 | P0AD98 | Negative | 2436537 - 2437649 | 39248.9 |
| aspartate 1-decarboxylase autocleavage activator panm | O1Q98_11095 | P37613 | Positive | 2438051 - 2438470 | 16013.9 |
| rna polymerase sigma factor rpoh | O1Q98_11100 | P50510 | Negative | 2438614 - 2439471 | 32720.0 |
| permease-like cell division protein ftsx | O1Q98_11105 | P0AC31 | Negative | 2439772 - 2440740 | 35300.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

