Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3142 domain-containing protein | O1Q98_10960 | Not Available | Positive | 2405281 - 2406138 | 32256.3 |
| tetr family transcriptional regulator | O1Q98_10965 | P0ACT8 | Positive | 2406561 - 2407142 | 22243.8 |
| extracellular solute-binding protein | O1Q98_10970 | P43951 | Positive | 2407227 - 2408336 | 41891.3 |
| trna (cytidine(34)-2'-o)-methyltransferase | O1Q98_10975 | B8CHC9 | Negative | 2408447 - 2408911 | 17278.6 |
| duf2756 domain-containing protein | O1Q98_10980 | Not Available | Positive | 2409078 - 2409356 | 10816.9 |
| aec family transporter | O1Q98_10985 | P56949 | Negative | 2409416 - 2410372 | 34084.5 |
| glycerophosphodiester phosphodiesterase | O1Q98_10990 | P10908 | Negative | 2410558 - 2411301 | 27309.5 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | O1Q98_10995 | Q6CZ34 | Negative | 2411298 - 2412374 | 39452.9 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | O1Q98_11000 | Q6CZ33 | Negative | 2412381 - 2413229 | 31806.8 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | O1Q98_11005 | Q6CZ32 | Negative | 2413256 - 2414143 | 32714.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

