Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | O1Q98_10640 | Q54435 | Positive | 2344645 - 2345451 | 30640.3 |
| pantetheine-phosphate adenylyltransferase | O1Q98_10645 | C6DIB6 | Positive | 2345438 - 2345926 | 17962.9 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | O1Q98_10650 | Q6DAV4 | Negative | 2345946 - 2346755 | 29991.0 |
| 50s ribosomal protein l33 | O1Q98_10655 | C5B9D7 | Negative | 2346828 - 2346995 | 6373.91 |
| 50s ribosomal protein l28 | O1Q98_10660 | C5B9D6 | Negative | 2347007 - 2347243 | 8965.01 |
| dna repair protein radc | O1Q98_10665 | Q6DAV7 | Negative | 2347483 - 2348148 | 24890.2 |
| duf2202 domain-containing protein | O1Q98_10670 | Not Available | Positive | 2348386 - 2348880 | 18163.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | O1Q98_10675 | P0ABQ1 | Positive | 2349033 - 2350328 | 45850.2 |
| dutp diphosphatase | O1Q98_10680 | Q6DAV9 | Positive | 2350297 - 2350755 | 16091.4 |
| nucleoid occlusion factor slma | O1Q98_10685 | Q6DAW0 | Positive | 2350860 - 2351456 | 22861.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

