Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | O1Q98_10490 | C6DI80 | Negative | 2309560 - 2310333 | 26579.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | O1Q98_10495 | C6DI81 | Negative | 2310358 - 2311362 | 36102.4 |
| acetylornithine deacetylase | O1Q98_10500 | Q6DAR2 | Positive | 2311576 - 2312727 | 41990.3 |
| phosphoenolpyruvate carboxylase | O1Q98_10505 | C6DI86 | Positive | 2313010 - 2315649 | 98899.9 |
| tyrosine-protein phosphatase | O1Q98_10510 | P40289 | Negative | 2315698 - 2316480 | 28698.3 |
| uridine phosphorylase | O1Q98_10515 | O08444 | Negative | 2316702 - 2317469 | 26956.3 |
| dienelactone hydrolase family protein | O1Q98_10520 | Q9L6M9 | Positive | 2317725 - 2318564 | 30498.2 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | O1Q98_10525 | Q6DAS2 | Negative | 2318729 - 2320996 | 84507.8 |
| is5 family transposase | O1Q98_10530 | P0A9G0 | Positive | 2321101 - 2322040 | 32223.4 |
| carboxylate/amino acid/amine transporter | O1Q98_10535 | P0A1U3 | Negative | 2321943 - 2322842 | 33771.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

