Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | O1Q98_10440 | Q59643 | Negative | 2299520 - 2300542 | 37752.4 |
| 3'-5' ssdna/rna exonuclease tatd | O1Q98_10445 | E0SLH6 | Negative | 2300555 - 2301340 | 28928.6 |
| sec-independent protein translocase subunit tatc | O1Q98_10450 | Q8FBI6 | Negative | 2301472 - 2302242 | 28560.8 |
| sec-independent protein translocase protein tatb | O1Q98_10455 | Q66FS6 | Negative | 2302246 - 2302839 | 20778.6 |
| sec-independent protein translocase subunit tata | O1Q98_10460 | Q7MZ84 | Negative | 2302843 - 2303100 | 9091.91 |
| ubiquinone biosynthesis regulatory protein kinase ubib | O1Q98_10465 | Q6DAQ5 | Negative | 2303174 - 2304811 | 63052.3 |
| scp2 domain-containing protein | O1Q98_10470 | P0ADP7 | Negative | 2304808 - 2305416 | 22810.7 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | O1Q98_10475 | C6DI77 | Negative | 2305430 - 2306185 | 27826.6 |
| dna recombination protein rmuc | O1Q98_10480 | Q8ZAL8 | Negative | 2306329 - 2307870 | 58001.8 |
| argininosuccinate lyase | O1Q98_10485 | C6DI79 | Negative | 2308069 - 2309442 | 49965.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

