Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | O1Q98_10390 | Q9L6L1 | Negative | 2288451 - 2288990 | 20578.0 |
| trk system potassium transporter trkh | O1Q98_10395 | P0AFZ8 | Negative | 2289010 - 2290461 | 52927.2 |
| impact family protein | O1Q98_10400 | P27862 | Negative | 2290502 - 2291116 | 21968.4 |
| xaa-pro dipeptidase | O1Q98_10405 | Q6DAP4 | Negative | 2291116 - 2292447 | 50111.8 |
| fatty acid oxidation complex subunit alpha fadb | O1Q98_10410 | Q6DAP5 | Positive | 2292631 - 2294820 | 78853.5 |
| acetyl-coa c-acyltransferase fada | O1Q98_10415 | Q6DAP6 | Positive | 2294833 - 2295996 | 40886.3 |
| metalloregulator arsr/smtb family transcription factor | O1Q98_10420 | Q8UAA8 | Negative | 2296074 - 2296403 | 12134.8 |
| nad(p)h-flavin reductase | O1Q98_10425 | Q9L6L9 | Negative | 2296523 - 2297224 | 26006.2 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | O1Q98_10430 | Q6DAP8 | Negative | 2297274 - 2298770 | 56185.7 |
| transcription/translation regulatory transformer protein rfah | O1Q98_10435 | Q0TAL4 | Positive | 2298968 - 2299456 | 18606.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

