Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | O1Q98_10240 | B7UPE9 | Positive | 2254309 - 2256294 | 73645.4 |
| thiamine phosphate synthase | O1Q98_10245 | Q6DAM1 | Positive | 2256294 - 2256941 | 23094.9 |
| hesa/moeb/thif family protein | O1Q98_10250 | P30138 | Positive | 2256931 - 2257692 | 26650.3 |
| sulfur carrier protein this | O1Q98_10255 | O32583 | Positive | 2257676 - 2257876 | 7246.68 |
| thiazole synthase | O1Q98_10260 | A8G8F0 | Positive | 2257888 - 2258658 | 27034.1 |
| 2-iminoacetate synthase thih | O1Q98_10265 | Q9S498 | Positive | 2258658 - 2259803 | 43486.9 |
| is5 family transposase | O1Q98_10270 | P39389 | Negative | 2259926 - 2261348 | 50965.5 |
| duf1127 domain-containing protein | O1Q98_10275 | P39390 | Positive | 2261975 - 2262151 | 7066.54 |
| duf1176 domain-containing protein | O1Q98_10280 | P76559 | Negative | 2262421 - 2263545 | 41387.1 |
| duf1176 domain-containing protein | O1Q98_10285 | P76559 | Negative | 2263667 - 2264761 | 40146.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

