Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pseudo | Not Available | Not Available | Positive | 2243889 - 2243964 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2244051 - 2245593 | Not Available |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | O1Q98_10200 | C6DHT5 | Positive | 2246214 - 2247803 | 57175.1 |
| phosphoribosylamine--glycine ligase | O1Q98_10205 | Q8ZAR2 | Positive | 2247819 - 2249108 | 45245.9 |
| is5 family transposase | O1Q98_10210 | P32681 | Negative | 2249285 - 2249988 | 26742.0 |
| dna-binding protein hu-alpha | O1Q98_10215 | P0A1R7 | Negative | 2249993 - 2250265 | 9534.48 |
| yjag family protein | O1Q98_10220 | P0A1U5 | Negative | 2250518 - 2251108 | 22488.9 |
| deoxyribonuclease v | O1Q98_10225 | C6DHT0 | Negative | 2251220 - 2251894 | 24887.2 |
| uroporphyrinogen decarboxylase | O1Q98_10230 | C6DHS9 | Negative | 2251894 - 2252967 | 39219.2 |
| nad(+) diphosphatase | O1Q98_10235 | Q6DAL8 | Negative | 2253020 - 2253793 | 29452.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

