Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | O1Q98_10040 | Q6DAJ1 | Positive | 2211166 - 2211618 | 16500.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | O1Q98_10045 | P0ABE0 | Positive | 2211655 - 2212122 | 16461.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | O1Q98_10050 | P24182 | Positive | 2212134 - 2213477 | 49202.5 |
| yhdt family protein | O1Q98_10055 | P45566 | Positive | 2213727 - 2213969 | 9406.62 |
| sodium/pantothenate symporter | O1Q98_10060 | P16256 | Positive | 2213959 - 2215410 | 51677.0 |
| 50s ribosomal protein l11 methyltransferase | O1Q98_10065 | A8GK75 | Positive | 2215433 - 2216320 | 31944.1 |
| trna dihydrouridine synthase dusb | O1Q98_10070 | O52539 | Positive | 2216647 - 2217612 | 35477.9 |
| dna-binding transcriptional regulator fis | O1Q98_10075 | Q6DAJ8 | Positive | 2217636 - 2217932 | 11196.6 |
| duf4915 domain-containing protein | O1Q98_10080 | Not Available | Negative | 2218108 - 2220300 | 81158.9 |
| abc transporter atp-binding protein | O1Q98_10085 | Q07698 | Negative | 2220293 - 2221786 | 55264.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

