Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | O1Q98_09940 | P25197 | Negative | 2184950 - 2188171 | 115122.0 |
| efflux rnd transporter periplasmic adaptor subunit | O1Q98_09945 | B4EY99 | Negative | 2188161 - 2189267 | 38838.3 |
| lyse family transporter | O1Q98_09950 | Q8Z3B4 | Negative | 2189476 - 2189886 | 15029.8 |
| lyse family transporter | O1Q98_09955 | Not Available | Negative | 2189798 - 2190106 | 10515.0 |
| duf1543 domain-containing protein | O1Q98_09960 | Not Available | Positive | 2190248 - 2190748 | 18828.3 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | O1Q98_09965 | D2C1Z6 | Negative | 2190753 - 2192708 | 71268.5 |
| p-hydroxybenzoic acid efflux pump subunit aaea | O1Q98_09970 | C6DIM2 | Negative | 2192721 - 2193668 | 34645.6 |
| p-hydroxybenzoic acid efflux pump operon protein aaex | O1Q98_09975 | C6C4L9 | Negative | 2193676 - 2193879 | 7787.98 |
| hth-type transcriptional activator aaer | O1Q98_09980 | P67664 | Positive | 2194237 - 2195181 | 35158.5 |
| is5 family transposase | O1Q98_09985 | P0AGG9 | Negative | 2195259 - 2196705 | 51859.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

