Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter atp-binding protein | O1Q98_09890 | P0A9V3 | Positive | 2177271 - 2177996 | 26875.5 |
| rna polymerase factor sigma-54 | O1Q98_09895 | P06223 | Positive | 2178062 - 2179495 | 53627.3 |
| ribosome hibernation promoting factor | O1Q98_09900 | P26983 | Positive | 2179520 - 2179807 | 10907.2 |
| pts iia-like nitrogen regulatory protein ptsn | O1Q98_09905 | P69829 | Positive | 2179899 - 2180387 | 17902.7 |
| rnase adapter rapz | O1Q98_09910 | B2VGV3 | Positive | 2180546 - 2181400 | 32509.1 |
| pts phosphocarrier protein npr | O1Q98_09915 | P0A9N2 | Positive | 2181397 - 2181669 | 9891.84 |
| nucleoside diphosphate kinase regulator | O1Q98_09920 | P0AFW6 | Positive | 2181834 - 2182244 | 14978.9 |
| metalloprotease pmba | O1Q98_09925 | P0AFK1 | Negative | 2182297 - 2183637 | 47701.7 |
| ribosome-associated protein | O1Q98_09930 | C6DIM5 | Positive | 2183839 - 2184387 | 21027.9 |
| rhodanese-like domain-containing protein | O1Q98_09935 | P54510 | Negative | 2184476 - 2184790 | 11469.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

