Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane channel protein tolc | O1Q98_09690 | P02930 | Positive | 2135805 - 2137214 | 50531.3 |
| duf1190 family protein | O1Q98_09695 | A8GJS8 | Positive | 2137407 - 2138240 | 29580.3 |
| glutathionylspermidine synthase family protein | O1Q98_09700 | P0ADT7 | Positive | 2138253 - 2139413 | 44832.9 |
| 4,5-dopa dioxygenase extradiol | O1Q98_09705 | P24197 | Negative | 2139506 - 2140294 | 28785.2 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2140556 - 2140934 | Not Available |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | O1Q98_09715 | P67088 | Negative | 2140967 - 2141845 | 32388.8 |
| penicillin-binding protein activator | O1Q98_09720 | C6CMD7 | Positive | 2141905 - 2143908 | 70527.2 |
| yran family protein | O1Q98_09725 | A8GJZ1 | Positive | 2143917 - 2144261 | 12673.1 |
| dnaa initiator-associating protein diaa | O1Q98_09730 | A1JR74 | Positive | 2144299 - 2144889 | 21013.3 |
| division/outer membrane stress-associated lipid-binding lipoprotein | O1Q98_09735 | Q7CPQ6 | Positive | 2144900 - 2145475 | 20184.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

