Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction-modification system subunit m | O1Q98_09340 | P10484 | Negative | 2056917 - 2058440 | 57611.5 |
| restriction endonuclease subunit s | O1Q98_09345 | Not Available | Negative | 2058550 - 2059026 | 17697.4 |
| hypothetical protein | O1Q98_09350 | Not Available | Negative | 2059163 - 2059330 | 6323.82 |
| integrase arm-type dna-binding domain-containing protein | O1Q98_09355 | P39347 | Negative | 2059598 - 2060845 | 47491.9 |
| Trna-leu | Not Available | Not Available | Positive | 2061032 - 2061116 | Not Available |
| lps export abc transporter permease lptg | O1Q98_09365 | P0ADC7 | Negative | 2061322 - 2062392 | 39163.6 |
| is5 family transposase | O1Q98_09370 | P0AFA0 | Negative | 2062394 - 2063513 | 39304.9 |
| leucyl aminopeptidase | O1Q98_09375 | C6DJN2 | Positive | 2063797 - 2065305 | 54759.9 |
| dna polymerase iii subunit chi | O1Q98_09380 | P28905 | Positive | 2065421 - 2065870 | 16847.9 |
| valine--trna ligase | O1Q98_09385 | Q6DA54 | Positive | 2065883 - 2068738 | 107867.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

