Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribbon-helix-helix domain-containing protein | O1Q98_09290 | Not Available | Negative | 2044802 - 2045629 | 31888.5 |
| inovirus gp2 family protein | O1Q98_09295 | P77657 | Positive | 2046372 - 2047001 | 24566.5 |
| alpa family phage regulatory protein | O1Q98_09300 | P12552 | Positive | 2047122 - 2047334 | 8290.0 |
| hypothetical protein | O1Q98_09305 | Not Available | Positive | 2047414 - 2047989 | 22271.3 |
| is5 family transposase | O1Q98_09310 | P39213 | Negative | 2048227 - 2049400 | 41446.5 |
| restriction endonuclease | O1Q98_09315 | P24202 | Negative | 2049553 - 2050467 | 33702.1 |
| sprt family zinc-dependent metalloprotease | O1Q98_09320 | Not Available | Negative | 2050631 - 2051353 | 28148.3 |
| is5 family transposase | O1Q98_09325 | O05052 | Negative | 2051384 - 2054670 | 116522.0 |
| rhum family protein | O1Q98_09330 | Not Available | Negative | 2054667 - 2055716 | 40568.1 |
| restriction endonuclease subunit s | O1Q98_09335 | Q57594 | Negative | 2055713 - 2056927 | 45100.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

