Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | O1Q98_09240 | Q01610 | Positive | 2038343 - 2039260 | 33895.9 |
| duf6088 family protein | O1Q98_09245 | Not Available | Negative | 2039611 - 2040006 | 14298.3 |
| type ii toxin-antitoxin system rele/pare family toxin | O1Q98_09250 | Not Available | Negative | 2040043 - 2040318 | 11195.1 |
| ribbon-helix-helix domain-containing protein | O1Q98_09255 | P55533 | Negative | 2040322 - 2040570 | 9020.85 |
| duf4942 domain-containing protein | O1Q98_09260 | Not Available | Negative | 2040681 - 2041514 | 31916.2 |
| ta system toxin cbta family protein | O1Q98_09265 | P77692 | Negative | 2041633 - 2041953 | 11956.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | O1Q98_09270 | P76364 | Negative | 2041979 - 2042380 | 14604.5 |
| dna repair protein radc | O1Q98_09275 | Q47685 | Negative | 2042380 - 2042853 | 18001.9 |
| duf932 domain-containing protein | O1Q98_09280 | P52132 | Negative | 2042884 - 2043705 | 31285.3 |
| gtpase family protein | O1Q98_09285 | P52131 | Negative | 2043802 - 2044668 | 31958.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

