Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | O1Q98_09140 | Q57RB2 | Positive | 2015087 - 2016829 | 62617.6 |
| hth-type transcriptional activator rhar | O1Q98_09145 | Q6DA21 | Negative | 2016944 - 2017798 | 32986.5 |
| hth-type transcriptional activator rhas | O1Q98_09150 | Q6DA22 | Negative | 2017864 - 2018688 | 31369.2 |
| is5 family transposase | O1Q98_09155 | C6DJR3 | Positive | 2019078 - 2020567 | 53776.5 |
| l-rhamnose isomerase | O1Q98_09160 | C6DJR2 | Positive | 2020564 - 2021820 | 47330.1 |
| is5 family transposase | O1Q98_09165 | C6DJR1 | Positive | 2021830 - 2022661 | 30949.9 |
| l-rhamnose mutarotase | O1Q98_09170 | A8AL34 | Positive | 2022838 - 2023152 | 12542.9 |
| methyl-accepting chemotaxis protein | O1Q98_09175 | P21822 | Positive | 2023560 - 2025158 | 57657.8 |
| iclr family transcriptional regulator | O1Q98_09180 | P37671 | Negative | 2025270 - 2026082 | 29868.1 |
| mfs transporter | O1Q98_09185 | Not Available | Positive | 2026684 - 2027916 | 45118.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

