Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter | O1Q98_08890 | O34245 | Positive | 1967266 - 1968567 | 45538.4 |
| divalent cation tolerance protein cuta | O1Q98_08895 | Q6D9J5 | Positive | 1968704 - 1969048 | 12455.8 |
| protein-disulfide reductase dsbd | O1Q98_08900 | Q57GQ5 | Positive | 1969024 - 1970769 | 62846.1 |
| transcriptional regulator | O1Q98_08905 | P0ACU8 | Positive | 1970889 - 1971464 | 21965.6 |
| Trna-phe | Not Available | Not Available | Positive | 1971615 - 1971690 | Not Available |
| is5 family transposase | O1Q98_08915 | Not Available | Positive | 1971804 - 1972032 | 8609.61 |
| type ii toxin-antitoxin system antitoxin ccda | O1Q98_08920 | P62553 | Positive | 1972125 - 1972343 | 8201.6 |
| type ii toxin-antitoxin system toxin ccdb | O1Q98_08925 | Q52042 | Positive | 1972346 - 1972651 | 11652.2 |
| aaa family atpase | O1Q98_08930 | Q91G49 | Negative | 1972805 - 1975177 | 91485.0 |
| hypothetical protein | O1Q98_08935 | Not Available | Negative | 1975170 - 1975889 | 28314.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

