Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc uptake transcriptional repressor zur | O1Q98_08840 | P0AC51 | Positive | 1956168 - 1956677 | 19266.9 |
| transcriptional repressor lexa | O1Q98_08845 | C6DKD2 | Negative | 1957133 - 1957744 | 22353.1 |
| diacylglycerol kinase | O1Q98_08850 | P0ABN3 | Negative | 1957855 - 1958220 | 13020.2 |
| is5 family transposase | O1Q98_08855 | C6DKD0 | Positive | 1958349 - 1960836 | 90592.8 |
| 4-hydroxybenzoate octaprenyltransferase | O1Q98_08860 | C6DKC9 | Negative | 1960878 - 1961726 | 31296.0 |
| chorismate lyase | O1Q98_08865 | C6DKC8 | Negative | 1961763 - 1962278 | 19447.5 |
| chaperonin groel | O1Q98_08870 | O66210 | Negative | 1962532 - 1964178 | 57350.4 |
| co-chaperone groes | O1Q98_08875 | Q6D9J1 | Negative | 1964229 - 1964522 | 10383.7 |
| fxsa family protein | O1Q98_08880 | P37147 | Negative | 1964717 - 1965223 | 18748.2 |
| aspartate ammonia-lyase | O1Q98_08885 | P33109 | Positive | 1965655 - 1967094 | 52560.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

