Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | O1Q98_08690 | Q46856 | Negative | 1921348 - 1922505 | 41717.1 |
| lysr substrate-binding domain-containing protein | O1Q98_08695 | A0A0H2ZDG9 | Positive | 1922699 - 1923655 | 34413.7 |
| duf1471 domain-containing protein | O1Q98_08700 | P0AAX4 | Positive | 1924019 - 1924270 | 8742.41 |
| helix-turn-helix domain-containing protein | O1Q98_08705 | Q48413 | Positive | 1924395 - 1924745 | 13778.5 |
| sdr family oxidoreductase | O1Q98_08710 | Q8AVY8 | Negative | 1924828 - 1925691 | 30921.3 |
| aldo/keto reductase | O1Q98_08715 | O05408 | Positive | 1925806 - 1926855 | 38350.3 |
| tetr/acrr family transcriptional regulator | O1Q98_08720 | P0ACT0 | Positive | 1926949 - 1927530 | 21195.1 |
| fad:protein fmn transferase | O1Q98_08725 | B5XRA9 | Negative | 1927592 - 1928581 | 35966.3 |
| flavocytochrome c | O1Q98_08730 | B5XRB0 | Negative | 1928690 - 1931467 | 99222.8 |
| fad:protein fmn transferase apbe | O1Q98_08735 | P0AB86 | Negative | 1932148 - 1933194 | 37754.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

