Dickeya lacustris S29

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya lacustris S29 is a rod-shaped bacterium characterized by the presence of a single flagellum, which facilitates its motility. This species possesses one replicon in its genetic structure, indicating a streamlined genome organization. The accession number for its genomic data is CP114280.1, which can be referenced for more detailed genetic and molecular studies. As a member of the Dickeya genus, which is known for its role as a plant pathogen, D. lacustris S29 may contribute to ecological interactions within aquatic environments. The presence of flagella suggests that this bacterium can actively move through its habitat, which may enhance its ability to colonize plant surfaces or interact with other microbial communities. Understanding the motility and genetic characteristics of Dickeya lacustris S29 can provide insights into its ecological role and potential impact on host plants. Since Dickeya species are often associated with plant diseases, studying D. lacustris S29 may offer valuable information regarding its pathogenic potential and interactions within aquatic ecosystems. This knowledge is crucial for developing strategies to manage plant health and mitigate the effects of bacterial infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya lacustris
StrainS29

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatlake water; rhizosphere of waterside plants
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya lacustris S29, Complete Genome

Gene Summary

Adenine Count

1019733 bp

Thymine Count

1028288 bp

Guanine Count

1167877 bp

Cytosine Count

1151875 bp

Genome Length

4367773 bp

Protein-coding Genes

3671 genes

Non-Coding Genes

291 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aldo/keto reductaseO1Q98_08640Q7XT99Positive1911229 - 191221836322.6
lysr family transcriptional regulatorO1Q98_08645Q01610Negative1912297 - 191319333642.9
sdr family oxidoreductaseO1Q98_08650B7UEU8Positive1913356 - 191413828717.4
sdr family oxidoreductaseO1Q98_08655E0D7H5Negative1914566 - 191539629315.1
aldo/keto reductaseO1Q98_08660O94315Positive1916051 - 191692631934.5
sdr family nad(p)-dependent oxidoreductaseO1Q98_08665Q4A054Positive1917042 - 191769223084.8
tetr/acrr family transcriptional regulatorO1Q98_08670P39885Positive1917763 - 191834121514.1
lysr family transcriptional regulatorO1Q98_08675P30864Negative1918741 - 191965233906.0
superoxide dismutaseO1Q98_08680Not AvailablePositive1919993 - 192029211092.4
is5 family transposaseO1Q98_08685Q5AF03Positive1920529 - 192121924588.1

Displaying genes 1851 – 1860 of 3962 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.