Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | O1Q98_08540 | P07040 | Negative | 1891337 - 1891723 | 14494.5 |
| helix-turn-helix transcriptional regulator | O1Q98_08545 | P0ACH3 | Positive | 1891912 - 1892181 | 9853.73 |
| malate dehydrogenase | O1Q98_08550 | A8AQC8 | Negative | 1892252 - 1893190 | 32407.4 |
| transcriptional regulator argr | O1Q98_08555 | C6DKH0 | Positive | 1893662 - 1894132 | 17180.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | O1Q98_08560 | C6DKG9 | Negative | 1894240 - 1895253 | 35565.7 |
| 30s ribosomal protein s21 | O1Q98_08565 | A8APV6 | Positive | 1895482 - 1895697 | 8500.42 |
| dna primase | O1Q98_08570 | Q8FDG5 | Positive | 1895826 - 1897580 | 66561.9 |
| rna polymerase sigma factor rpod | O1Q98_08575 | P00579 | Positive | 1897737 - 1899578 | 70364.3 |
| Trna-met | Not Available | Not Available | Positive | 1899787 - 1899862 | Not Available |
| is5 family transposase | O1Q98_08585 | Not Available | Negative | 1899965 - 1900078 | 4278.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

