Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | O1Q98_08490 | Q5PLC1 | Negative | 1882659 - 1883288 | 23335.5 |
| ribosome assembly rna-binding protein yhby | O1Q98_08495 | P0AGK6 | Positive | 1883562 - 1883855 | 10763.3 |
| transcription elongation factor grea | O1Q98_08500 | P64282 | Negative | 1883981 - 1884457 | 17747.2 |
| serine-type d-ala-d-ala carboxypeptidase | O1Q98_08505 | P24228 | Positive | 1884721 - 1886154 | 52081.7 |
| obg family gtpase cgta | O1Q98_08510 | Q6D9C3 | Negative | 1886282 - 1887457 | 43219.0 |
| dmt family transporter | O1Q98_08515 | P0AA74 | Negative | 1887725 - 1888669 | 34248.4 |
| 50s ribosomal protein l27 | O1Q98_08520 | A7MJF4 | Negative | 1888773 - 1889030 | 9114.98 |
| 50s ribosomal protein l21 | O1Q98_08525 | C6DKH6 | Negative | 1889050 - 1889361 | 11522.0 |
| octaprenyl diphosphate synthase | O1Q98_08530 | P0AD57 | Positive | 1889621 - 1890592 | 35013.7 |
| dna-binding protein | O1Q98_08535 | P07040 | Negative | 1890602 - 1891021 | 16051.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

