Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad assembly factor sdhe | O1Q98_08240 | G4V4G2 | Negative | 1830663 - 1830929 | 10478.5 |
| pp_01616 | O1Q98_08245 | Not Available | Positive | 1831244 - 1832224 | Not Available |
| hemolysin iii family protein | O1Q98_08250 | P67155 | Negative | 1832305 - 1832955 | 23365.3 |
| hd domain-containing protein | O1Q98_08255 | Q7Z4H3 | Positive | 1833162 - 1833770 | 22865.6 |
| lyse family translocator | O1Q98_08260 | O05406 | Negative | 1833895 - 1834536 | 22511.3 |
| aminomethyl-transferring glycine dehydrogenase | O1Q98_08265 | C6D8X1 | Negative | 1834651 - 1837524 | 104515.0 |
| glycine cleavage system protein gcvh | O1Q98_08270 | C6D8X0 | Negative | 1837676 - 1838083 | 14453.4 |
| glycine cleavage system aminomethyltransferase gcvt | O1Q98_08275 | C6D8W9 | Negative | 1838113 - 1839213 | 40225.3 |
| is5 family transposase | O1Q98_08280 | P0A9S2 | Positive | 1839729 - 1840178 | 15921.1 |
| is5 family transposase | O1Q98_08285 | P50358 | Negative | 1840192 - 1841034 | 32166.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

