Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | O1Q98_07990 | Q8RD36 | Positive | 1770679 - 1771542 | 32008.3 |
| d-alanine--d-alanine ligase | O1Q98_07995 | Q8FKE3 | Positive | 1771767 - 1772870 | 39921.7 |
| ycii family protein | O1Q98_08000 | Not Available | Negative | 1773084 - 1773368 | 10580.7 |
| voc family protein | O1Q98_08005 | P37479 | Negative | 1773386 - 1773778 | 14731.8 |
| gnat family n-acetyltransferase | O1Q98_08010 | P26945 | Positive | 1773911 - 1774399 | 18071.9 |
| dini family protein | O1Q98_08015 | P0A1G4 | Positive | 1774476 - 1774715 | 9147.9 |
| gnat family n-acetyltransferase | O1Q98_08020 | O34569 | Negative | 1774856 - 1775407 | 20439.9 |
| hypothetical protein | O1Q98_08025 | Not Available | Negative | 1775536 - 1775958 | 15667.7 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | O1Q98_08030 | P52647 | Positive | 1776587 - 1780120 | 128745.0 |
| l,d-transpeptidase family protein | O1Q98_08035 | P0AAY0 | Positive | 1780418 - 1781455 | 37065.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

