Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rata family toxin | O1Q98_07690 | P0AGL5 | Negative | 1711503 - 1711937 | 15895.1 |
| ssra-binding protein smpb | O1Q98_07695 | A8ANF2 | Positive | 1712093 - 1712575 | 18276.1 |
| Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 1712626 - 1712989 | Not Available |
| hypothetical protein | O1Q98_07705 | Not Available | Positive | 1713072 - 1714451 | 52805.2 |
| is3 family transposase | O1Q98_07710 | Q47718 | Negative | 1714426 - 1715600 | 45330.3 |
| metallophosphoesterase | O1Q98_07715 | Q45600 | Negative | 1715659 - 1716732 | 39899.6 |
| gtpase family protein | O1Q98_07720 | P75678 | Positive | 1717071 - 1717937 | 31710.4 |
| duf932 domain-containing protein | O1Q98_07725 | P77206 | Positive | 1718029 - 1718862 | 31421.6 |
| deor family transcriptional regulator | O1Q98_07730 | P52133 | Positive | 1719071 - 1719781 | 26182.0 |
| duf4339 domain-containing protein | O1Q98_07735 | Not Available | Positive | 1719807 - 1720343 | 19972.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

