Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | O1Q98_07640 | Q6D8U8 | Positive | 1700841 - 1701773 | 35461.8 |
| yaii/yqxd family protein | O1Q98_07645 | A1JL36 | Positive | 1701773 - 1702222 | 16525.7 |
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | O1Q98_07650 | Q9ZFV8 | Negative | 1702277 - 1704556 | 82030.9 |
| gdp-mannose pyrophosphatase nudk | O1Q98_07655 | Q6D8X4 | Negative | 1704949 - 1705533 | 22030.4 |
| nramp family divalent metal transporter | O1Q98_07660 | C6D9J9 | Negative | 1705706 - 1706944 | 43927.2 |
| nucleotide exchange factor grpe | O1Q98_07665 | C6D9J8 | Negative | 1707299 - 1707886 | 21777.0 |
| nad(+) kinase | O1Q98_07670 | Q6D8Y0 | Positive | 1708049 - 1708927 | 32342.6 |
| dna repair protein recn | O1Q98_07675 | P05824 | Positive | 1709011 - 1710672 | 61885.0 |
| outer membrane protein assembly factor bame | O1Q98_07680 | Q7CPZ3 | Positive | 1710784 - 1711128 | 12708.4 |
| rnfh family protein | O1Q98_07685 | Q2NRZ8 | Negative | 1711217 - 1711510 | 11118.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

