Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dyp-type peroxidase | O1Q98_07590 | Q8XBI9 | Negative | 1687308 - 1688207 | 33690.0 |
| cytosine permease | O1Q98_07595 | Q8X691 | Negative | 1688380 - 1689687 | 45748.9 |
| luxr c-terminal-related transcriptional regulator | O1Q98_07600 | Not Available | Negative | 1689703 - 1690380 | 26199.3 |
| helix-turn-helix transcriptional regulator | O1Q98_07605 | P0ACH3 | Positive | 1690655 - 1690948 | 10977.0 |
| rpoe-regulated lipoprotein | O1Q98_07610 | P76537 | Negative | 1691027 - 1691617 | 21207.3 |
| abc transporter atp-binding protein/permease | O1Q98_07615 | P31826 | Negative | 1691807 - 1693468 | 62940.1 |
| insulinase family protein | O1Q98_07620 | P31828 | Negative | 1693465 - 1696245 | 104129.0 |
| tonb-dependent receptor | O1Q98_07625 | P31827 | Negative | 1696347 - 1698908 | 96411.1 |
| tonb family protein | O1Q98_07630 | P25945 | Negative | 1698945 - 1699910 | 34614.6 |
| gnat family acetyltransferase | O1Q98_07635 | Q6D8U7 | Negative | 1700216 - 1700641 | 16215.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

