Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | lake water; rhizosphere of waterside plants |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | O1Q98_06690 | Q6D221 | Negative | 1507124 - 1507858 | 27419.2 |
| gtpase era | O1Q98_06695 | A1JKK4 | Negative | 1507870 - 1508775 | 34183.4 |
| ribonuclease iii | O1Q98_06700 | C6DC00 | Negative | 1508772 - 1509452 | 25561.8 |
| signal peptidase i | O1Q98_06705 | P0A1W3 | Negative | 1509633 - 1510586 | 34902.0 |
| translation elongation factor 4 | O1Q98_06710 | C6DC02 | Negative | 1510603 - 1512402 | 66504.3 |
| soxr-reducing system protein rsec | O1Q98_06715 | P46187 | Negative | 1512652 - 1513128 | 16984.8 |
| sigma-e factor regulatory protein rseb | O1Q98_06720 | D0ZSY7 | Negative | 1513125 - 1514075 | 34935.5 |
| anti-sigma-e factor rsea | O1Q98_06725 | D0ZSY8 | Negative | 1514075 - 1514749 | 24214.7 |
| rna polymerase sigma factor rpoe | O1Q98_06730 | D0ZSY9 | Negative | 1514798 - 1515373 | 21692.7 |
| l-aspartate oxidase | O1Q98_06735 | Q8ZD80 | Positive | 1515720 - 1517324 | 59359.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

