Bradyrhizobium diazoefficiens 3I1B110, R-12974

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium diazoefficiens 3I1B110, designated as R-12974, is a Gram-negative bacterium primarily found in soil environments. This species exhibits a rod shape and possesses flagella, which facilitate its motility in aerobic conditions. Its optimal growth temperature is 29°C, placing it within the mesophilic temperature range. Notably, Bradyrhizobium diazoefficiens 3I1B110 has a single replicon, which is significant for its genetic stability and replication efficiency. This strain is known to form symbiotic relationships with Glycine max (soybean), making it an important organism in agricultural microbiology. The symbiosis between this bacterium and its host plant enables the fixation of atmospheric nitrogen, thus enhancing soil fertility and supporting plant growth. The accession number for this strain is CP011360.1, which allows for further exploration of its genomic data and characteristics. Understanding the traits of Bradyrhizobium diazoefficiens 3I1B110 can provide insights into its role in soil ecosystems and its potential applications in sustainable agriculture, particularly in improving nitrogen availability for crops like soybean. This bacterium's adaptation to aerobic conditions and its optimal temperature suggest that it thrives in well-aerated soils, which is crucial for the health of agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium diazoefficiens
Strain3I1B110, R-12974

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bradyrhizobium diazoefficiens 3I1B110, R-12974
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Glycine max
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium diazoefficiens 3I1B110, R-12974, Complete Genome

Gene Summary

Adenine Count

1635201 bp

Thymine Count

1637574 bp

Guanine Count

2917770 bp

Cytosine Count

2915519 bp

Genome Length

9106064 bp

Protein-coding Genes

8220 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiosulfate sulfurtransferaseAAV28_37550Q15ZU3Negative8065384 - 806661644435.7
membrane proteinAAV28_37555Not AvailableNegative8066692 - 806788843472.5
tonb-dependent receptorAAV28_37560Q9HUX3Negative8067891 - 807021283770.3
dihydrodipicolinate synthaseAAV28_37565A9WE23Negative8070426 - 807131030439.0
fad-linked oxidaseAAV28_37570B8B7X6Positive8071489 - 807290150352.2
gntr family transcriptional regulatorAAV28_37575O05494Positive8072928 - 807360824676.7
hypothetical proteinAAV28_37580Q89C25Positive8074181 - 807620274986.2
transcriptional regulatorAAV28_37585P71036Positive8076613 - 807707116439.1
methyltransferaseAAV28_37590Q1QUG4Positive8077068 - 807778125825.8
hypothetical proteinAAV28_37595Not AvailableNegative8078005 - 807862521738.9

Displaying genes 7321 – 7330 of 8276 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.