Bradyrhizobium diazoefficiens 3I1B110, R-12974

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Bradyrhizobium

Description

Bradyrhizobium diazoefficiens 3I1B110, designated as R-12974, is a Gram-negative bacterium primarily found in soil environments. This species exhibits a rod shape and possesses flagella, which facilitate its motility in aerobic conditions. Its optimal growth temperature is 29°C, placing it within the mesophilic temperature range. Notably, Bradyrhizobium diazoefficiens 3I1B110 has a single replicon, which is significant for its genetic stability and replication efficiency. This strain is known to form symbiotic relationships with Glycine max (soybean), making it an important organism in agricultural microbiology. The symbiosis between this bacterium and its host plant enables the fixation of atmospheric nitrogen, thus enhancing soil fertility and supporting plant growth. The accession number for this strain is CP011360.1, which allows for further exploration of its genomic data and characteristics. Understanding the traits of Bradyrhizobium diazoefficiens 3I1B110 can provide insights into its role in soil ecosystems and its potential applications in sustainable agriculture, particularly in improving nitrogen availability for crops like soybean. This bacterium's adaptation to aerobic conditions and its optimal temperature suggest that it thrives in well-aerated soils, which is crucial for the health of agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusBradyrhizobium
SpeciesBradyrhizobium diazoefficiens
Strain3I1B110, R-12974

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bradyrhizobium diazoefficiens 3I1B110, R-12974
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatsoil
Biotic relationshipNot Available
Host(s)Glycine max
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bradyrhizobium diazoefficiens 3I1B110, R-12974, Complete Genome

Gene Summary

Adenine Count

1635201 bp

Thymine Count

1637574 bp

Guanine Count

2917770 bp

Cytosine Count

2915519 bp

Genome Length

9106064 bp

Protein-coding Genes

8220 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor iAAV28_35115P45388Positive7542847 - 754326315740.0
hypothetical proteinAAV28_35120Not AvailableNegative7543322 - 75436309854.65
cytochrome cAAV28_35125P00044Positive7544004 - 754432411550.0
lactoylglutathione lyaseAAV28_35130P0A0T2Positive7544325 - 754472015057.9
twin-arginine translocation pathway signalAAV28_35135Not AvailablePositive7544764 - 754531220375.1
2-keto-gluconate dehydrogenaseAAV28_35140Q3YAT3Positive7545343 - 754691156217.8
arylsulfate sulfotransferaseAAV28_35145Not AvailableNegative7547161 - 754747812093.4
dna mismatch repair protein mutlAAV28_35150Q89DE6Positive7547718 - 754952965369.0
dna methyltransferaseAAV28_35155P0ADY0Negative7549531 - 755008820126.9
pseudouridine synthaseAAV28_35160Q9ZD06Negative7550089 - 755216779436.4

Displaying genes 6851 – 6860 of 8276 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.