Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aquaticum |
| Strain | A212-S19-A16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1087875 bp
Thymine Count
1088692 bp
Guanine Count
1148674 bp
Cytosine Count
1139184 bp
Genome Length
4464425 bp
Protein-coding Genes
3959 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DMB82_0002810 | P94312 | Positive | 598550 - 599416 | 30751.4 |
| abc transporter atp-binding protein | DMB82_0002815 | Q57RB2 | Positive | 599413 - 601122 | 61407.1 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | DMB82_0002820 | P69347 | Positive | 601198 - 601449 | 9391.24 |
| txe/yoeb family addiction module toxin | DMB82_0002825 | P69348 | Positive | 601446 - 601700 | 10276.4 |
| reverse transcriptase family protein | DMB82_0002830 | Q46666 | Positive | 602078 - 603049 | 37299.0 |
| aaa family atpase | DMB82_0002835 | Not Available | Positive | 603046 - 604374 | 50968.0 |
| helix-turn-helix domain-containing protein | DMB82_0002840 | Q6DA21 | Negative | 604562 - 605416 | 32607.0 |
| hth-type transcriptional activator rhas | DMB82_0002845 | C6DJR4 | Negative | 605441 - 606280 | 31812.4 |
| rhamnulokinase | DMB82_0002850 | C6DJR3 | Positive | 606617 - 608107 | 54514.0 |
| l-rhamnose isomerase | DMB82_0002855 | C6DJR2 | Positive | 608104 - 609366 | 47268.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
