Pectobacterium aquaticum A212-S19-A16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium aquaticum A212-S19-A16 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has motility capabilities. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genome of Pectobacterium aquaticum A212-S19-A16 is accessible under the accession number CP086253.1. As a member of the genus Pectobacterium, this bacterium is likely involved in plant-pathogenic interactions, which may have implications for agricultural practices. The flagella may enhance its ability to colonize plant surfaces or move toward nutrients, highlighting its potential role in plant microbiomes and its interactions within those ecosystems. In ecological terms, the presence of Pectobacterium aquaticum A212-S19-A16 in various habitats may influence the health of plant populations, affecting their growth and yield. Understanding the characteristics of this bacterium can provide insights into its ecological roles and potential management strategies in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aquaticum
StrainA212-S19-A16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aquaticum A212-S19-A16, Complete Genome

Gene Summary

Adenine Count

1087875 bp

Thymine Count

1088692 bp

Guanine Count

1148674 bp

Cytosine Count

1139184 bp

Genome Length

4464425 bp

Protein-coding Genes

3959 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetr/acrr family transcriptional regulatorDMB82_0020675Q93PU7Positive4455947 - 445650120223.7
helix-turn-helix transcriptional regulatorDMB82_0020680P0ACN2Negative4456551 - 445696115226.5
sdr family oxidoreductaseDMB82_0020685P39315Positive4457104 - 445795529511.2
helix-turn-helix domain-containing proteinDMB82_0020690Q8FHF3Positive4458139 - 44584059886.67
type ii toxin-antitoxin system hipa family toxinDMB82_0020695P23874Positive4458405 - 445972449221.2
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeDMB82_0020700Q6CYQ9Negative4459881 - 446124549230.7
membrane protein insertase yidcDMB82_0020705C6DK98Negative4461374 - 446300860937.8
membrane protein insertion efficiency factor yiddDMB82_0020710Q1C0B5Negative4463011 - 44632689486.77
ribonuclease p protein componentDMB82_0020715Q6CYR1Negative4463232 - 446359113864.1
50s ribosomal protein l34DMB82_0020720Q6CYR2Negative4463610 - 44637505396.74

Displaying genes 4141 – 4150 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.