Pectobacterium aquaticum A212-S19-A16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium aquaticum A212-S19-A16 is a Gram-negative bacterium characterized by the presence of flagella, which suggests it has motility capabilities. This organism has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genome of Pectobacterium aquaticum A212-S19-A16 is accessible under the accession number CP086253.1. As a member of the genus Pectobacterium, this bacterium is likely involved in plant-pathogenic interactions, which may have implications for agricultural practices. The flagella may enhance its ability to colonize plant surfaces or move toward nutrients, highlighting its potential role in plant microbiomes and its interactions within those ecosystems. In ecological terms, the presence of Pectobacterium aquaticum A212-S19-A16 in various habitats may influence the health of plant populations, affecting their growth and yield. Understanding the characteristics of this bacterium can provide insights into its ecological roles and potential management strategies in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aquaticum
StrainA212-S19-A16

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aquaticum A212-S19-A16, Complete Genome

Gene Summary

Adenine Count

1087875 bp

Thymine Count

1088692 bp

Guanine Count

1148674 bp

Cytosine Count

1139184 bp

Genome Length

4464425 bp

Protein-coding Genes

3959 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nramp family divalent metal transporterDMB82_0016525C6D9J9Negative3557820 - 355905844011.2
nucleotide exchange factor grpeDMB82_0016530C6D9J8Negative3559321 - 355990821692.9
nad(+) kinaseDMB82_0016535Q6D8Y0Positive3560058 - 356093632211.6
dna repair protein recnDMB82_0016540P05824Positive3561018 - 356267961483.5
outer membrane protein assembly factor bameDMB82_0016545Q7CPZ3Positive3562832 - 356316712168.8
rnfh family proteinDMB82_0016550C6D972Negative3563406 - 356369610910.2
type ii toxin-antitoxin system rata family toxinDMB82_0016555Q8FEY4Negative3563677 - 356412316291.6
ssra-binding protein smpbDMB82_0016560C6D970Positive3564279 - 356476118298.1
Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacgaNot AvailableNot AvailablePositive3564811 - 3565173Not Available
duf1493 family proteinDMB82_0016570Not AvailableNegative3565456 - 356578513265.8

Displaying genes 3311 – 3320 of 4150 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.